A complete pipeline enables haplotyping and phasing macrohaplotype in long sequencing reads for polyploidy samples and a multi-source DNA mixture
Journal
Date Published
January 2024
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Evaluation and Implementation of High Throughput Second Generation Sequencing for Mitochondrial DNA Testing in Missing Persons and Forensic Casework at the UNT Center for Human Identification
Date Published
June 2023
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical),
Program/Project Evaluation
MPKin-YSTR: Interpretation of Y chromosome STR haplotypes for missing persons cases
Journal
Date Published
April 2023
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
TRcaller: A Novel Tool for Precise and Ultrafast Tandem Repeat Variant Genotyping in Massively Parallel Sequencing Reads
Journal
Date Published
2023
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Assessing sequence variation and genetic diversity of currently untapped Y-STR loci
Journal
Date Published
December 2022
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Optimized variant calling for estimating kinship
Date Published
November 2022
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
USAT: a bioinformatic toolkit to facilitate interpretation and comparative visualization of tandem repeat sequences
Journal
Date Published
November 2022
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
A machine learning approach for missing persons cases with high genotyping errors
Journal
Date Published
October 2022
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Re: Riman et al. Examining performance and likelihood ratios for two likelihood ratio systems using the PROVEDIt dataset
Date Published
July 2022
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
ProSynAR: a reference aware read merger
Journal
Date Published
April 2022
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Evaluating probabilistic genotyping for low-pass DNA sequencing
Date Published
2022
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Skater: An R Package for SNP-based Kinship Analysis, Testing, and Evaluation
Journal
Date Published
January 2022
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
vcferr: Development, validation, and application of a single nucleotide polymorphism genotyping error simulation framework
Journal
Date Published
2022
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
MMDIT: A tool for the deconvolution and interpretation of mitochondrial DNA mixtures
Date Published
November 2021
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Population Informative Markers Selected Using Wright's Fixation Index and Machine Learning Improves Human Identification Using the Skin Microbiome
Date Published
September 2021
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
ProDerAl: reference position dependent alignment
Journal
Date Published
August 2021
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Graph Algorithms for Mixture Interpretation
Journal
Date Published
2021
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Rolling circle amplification: A (random) primer on the enrichment of an infinite linear DNA template
Journal
Date Published
2020
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Typing Highly Degraded DNA Using Circularized Molecules and Target Enrichment
Date Published
June 2019
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Enhanced Sample Preparation and Data Interpretation Strategies for Massively Parallel Sequencing for Human Identification in Missing Persons and DVI Casework
Date Published
November 2018
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical),
Report (Study/Research)
Human Microbiome Species and Genes for Human Identification
Date Published
September 2018
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical),
Report (Study/Research),
Report (Grant Sponsored),
Program/Project Description
Enhancing Mixture Interpretation With Highly Informative STRs
Date Published
June 2018
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical),
Report (Study/Research),
Report (Grant Sponsored),
Program/Project Description,
Grants and Funding
Date Created: September 3, 2020